[推荐]30+的生物信息学blog

http://www.abhishek-tiwari.com/2009/02/30-blogs-about-bioinformatics-and.html

Blog	Author & linked github	Details	Langugae
Open.nfo		bioinformatics, linux, open-source software, open science
Bioinformatics Zen	Michael Barton	best practices for bioinformatics programming and software development
Genedrift	Paulo Nuin	a step-by-step guide to create Python applications in bioinformatics	Python
Blue Collar Bioinformatics	Brad Chapman	programing practical day to day work of biological data analysis and presentation	Python
Chem-bla-ics	Egon Willighagen	open source cheminformatics, computational chemistry programming	Java
Depth-First	Richard Apodaca	cheminformatics application development including databases	Java, Ruby, Rails
Mailund on the Internet	Thomas Mailund	phylogenetics , statistical programming in bioinformatics,	R
So much to do, so little time	Rajarshi Guha	open source chemoinformatics, QSAR and REST programming	REST, Java, Python
ChemHack	Duan Lian	JavaScript for Cheminformatics	JavaScript
One R Tip A Day	Paolo Sonego	statistical programming in bioinformatics	R
Programming for Scientists	Rich + Ben	Software development wisdom and common-sense for the scientist-programmer
Paul Davis	Paul Davis	Bioinformatics in Python, Bioinformatics Formats JSON	Python
Saaien Tist	Jan Aerts	visualization and annotation of chrmosomes in bioinformatics	Ruby
What You’re Doing Is Rather Desperate	Neil Saunders	computational analysis of protein-protein interactions	Perl
Your bones got a little machine	Andrew Perry	applications for structural biology and structural bioinformatics	Python
Scienceoss		excellent bioinformatics plotting , analysis resources	R, Python, IPython
Gregor Gorjanc	Gregor Gorjanc	code for statistical/quantitative genetics	R, SAS
Bleeding Edge Biotech	Adam Kraut	Parallel Programming, Grid Computing
YOKOFAKUN	Pierre Lindenbaum	Codifying bioinformatics, semantic web applications
Cognitive Consonance	Tiago Antao	Software engineering in a computational biology environment	Groovy, Java, DSL
Andrew Dalke	Andrew Dalke	software for computational chemistry and biology using Python	Python
iPhylo	Roderic Page	semantic web, taxonomy and phylogeny
It's Not Easy Being Genes	Chris Lasher	genetics, bioinformatics, and computational biology	Python
Daily Life in an Ivory Basement	Titus Brown	testing, and programming in bioinformatics	Python
The Third Bit	Gregory V. Wilson	open source software development for scientists and engineers	Java, Python
Biorelated	George Githinji	bioinformatics, biological software development	Ruby
Nakao’s bioruby blog	Nakao Mitsuteru	bioinformatics with bioruby	Ruby
igraph	Gabor Csardi	prorgrmming for graph theory and network analysis	R, Python
Inparablog	John van Dam	comparative genomics and bioinformatics	Perl, Python
Bioinfo Blog!		programming and testing in bioinformatics	Perl, Python
Mark Bieda’s Weblog	Mark Bieda	bioinformatics and genomics

[资讯]生物医学的基因组工作平台

在过去生物医学的工作者们，各自开发自己的程序，这样导致他们使用的工具有很大的不同。如果能够有更加统一的方法，研究工作会进展的更好。

为了解决这个问题,服务器在哥伦比亚大学的计算生物学和生物信息学中心的基因组和细胞网络的多维分析国家中心（ National Center for Multiscale Analysis of Genomic and Cellular Networks (MAGnet)）开发了, geWorkbench (genomics Workbench), 应用程序的开发和扩展框架。它为很多有用的生物医学图形分析和可视化软件提供了统一的接口。

GeWorkbench是一个整合了基因表达和序列分析，以及细胞网络分析，并且具有强大的可视话功能的基因组分析平台。

现在在geWorkbench上已经有50多个分析应用程序。开发者每年增加5－10个并对已有的进行维护和升级。如果研究者需要的使用其没有的功能，它会提供到 caGrid 的接口。 CaGrid 是在caBIG下的网格设施，提供了很多可以在线和远程使用的网格工具。

如果研究者仍然不能找到他们所需要的工具，还可以使用geWorkbench平台来使用很少的语言开发他们自己的工具。


“GeWorkbench provides a user-friendly interface where researchers can collect the information and applications they need, search for and use a grid service when necessary, and quickly get results,” said Aris Floratos, of the Center for Computational Biology and Bioinformatics.



—Amelia Williamson, for iSGTW